CDS

Accession Number TCMCG051C14003
gbkey CDS
Protein Id XP_024455209.1
Location join(11394695..11395524,11395618..11395822,11396085..11396236,11396325..11396574,11396696..11396848,11397322..11397525,11397669..11397781,11397889..11398003,11400007..11400096,11400215..11400418,11400519..11400614,11400695..11400817,11401777..11401869,11402011..11402175,11402268..11402357,11402451..11402630)
Gene LOC112323212
GeneID 112323212
Organism Populus trichocarpa

Protein

Length 1020aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024599441.1
Definition probable ubiquitin conjugation factor E4 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category O
Description Ubiquitin conjugation factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10596        [VIEW IN KEGG]
ko:K10597        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04120        [VIEW IN KEGG]
ko04141        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030433        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034450        [VIEW IN EMBL-EBI]
GO:0034976        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036503        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACGACCTCAAATAAACCTCAGAGATCTCTCCAAGAAATCGAGGACATTGTCCTCCGCAGAATCCTCTCAGTCTCCCTCGCCGACTCCTCTGATCCTCGAATTTTCTACTTAGAAATGACAGCAGCTGAGATTCTCAGTGAAGGCAAAGACTTGAAACTCACTCGCGACTTAATTGAACGTGTCTTGATCGATCGATTGTCTGTTCAAAGCCCTAACGCGGAACCTCCTTTCAATTACCTCTTAGGCTGCTACCGTCGTGCTGTTGATGAGTTGAAGAAAATCGCCAATATGAAGGACAAAAATGTGAAATCAGAGCTGGAATTGTCGATCAAGCAAGTCAAGAAGTTGTCGGTTTCGTATTGCAGGATTCATTTAGGGAATCCTGACTTGTTTGGGGGTGATTCGAGTGTTGTTAGAAAGAGCGGGAATTCCAATGTTTCTCCGGTTCTGCCCTTGATTTTTGCGATGGTTGATGGGTTTAATAGTGGCGGAATTCAGCCACCGCCGCCGGGGTTTATAGAGGAGTTTTTTAGAGAAGGGGATTTTGATAGCTTGGATCCGATTTTGAAGGGTTTATATGAGGATTTGAGGGGAAATGTTTTGAAGGTTTCTGTTTTAGGGAATTTTCAACAACCATTAAGGGCTTTATTGTTTTTGGTTAGTTTTAATGTCGGTGCTAAATCACTTGTTAGTCATAAGTGGTGGATTCCGACAGGGGCATATGTAAATGGGAGAGTTATTGAAATGACAAGTATTTTGGGTCCTTTTTTTCATATTAGTGCATGGCCTGATAATACTATTTTTAAGAGCGAGCCGGATGTGGGGCAGCAGTGTTTCTCTGATGCAACAAATCGTCGACCTGCTGATTTGTTATCTTCATTTACTACAATTAAGACTCTTGTGAATAATTTATATGATGGATTAGCAGAAGTGCTTCTTGCTCTTCTTAAAAATGGTGATACTCGTGAGAGTGTGCTTCAGTATCTTGCTGAGGTGATCAATAGAAATGCGACAAGAGCTCACATACAGGTCGATCCTTTATCTTGTGCAAGTTCGGGCATGTTTATCAATCTAAGTGCTGTCATGCTTAAGCTATCCGAACCTTTTTTAGATGCAAATTTGTCAAAAAGGAACAAAATTGATCCAAATTACGTGTTTCACAATAACCGTTTGGATCTAAGAGGGTTGACAGCTCTGCTTGCATCATCAGAAGAAATCACTCAATGGCTTAATACTCCGGGAAAAACTGATATCTCTGCACAATCTAATGATGTTGAAAATCGCTTGGTACAATCTCAAGAAGCCACCAGTTCTGGTAGAAGTGGTGAAAAGTCTAAATACTCATTTATTTGTGAGTGCTTCTTTATGACTGCAAGGGTGCTCAACTTGGGTCTGTTAAAAGCATTTTCCGACTTTAAGCATCTAGTTCAGGAAATTTCTAGATGCGAAGATATGCTCTCCACTTTTAAAGCCTTGCAGGAGCAGACGCCGTCTCAGCAGCTGCAGCAGGATATTGACCGTCTTGAGAAAGATATAGAGTTATATTCACAGGAAAAGCTTTGTTATGAAGCTCAAATATTAAGGGATGGAGCACTTATTCAGCGTGCACTTTCTTTCTACCGGTTAATGTTGGTTTGGTTGGTTAGCCTGGTCGGTGGATTTAAAATGCCTCTTCCATCAACTTGCCCAAAGGAATTTGCCTCAATGCCGGAGCATTTTGTGGAAGATGCCATGGAACTAATTATATTTGCCTCTCGGATTCCAAAAGCTTTGGATGGAGTCTTACTGGATGATTTTATGAACTTCATTATCATGTTCATGGCAAGTCCTACATATATTAGAAACCCTTATTTAAGAGCAAAGATGGTTGAAGTATTGAACTGCTGGATGCCACGGAGAAGTGGTTCATCTGCTACAGCTTCTCTATTTGAAGGGCACCAACTGTCACTTGAGTATCTTGTAAGGAACCTCTTGAAGCTTTATGTTGACATTGAGCTCACAGGCTCTCACACACAGTTCTATGACAAGTTCAACATACGGCATAATATTGCCGAACTTCTTGAATATCTATGGCTGGTCCCTAGTCATCGTGATATTTGGAGAAAGATTGCCAAGGAAGAGGAAAAGGGTGTCTATCTGAATTTCTTGAACTTCCTGATGAACGATAGCATCTATCTTCTTGATGAAAGTCTGAGCAAAATTCTTGAACTCAAAGGGTTAGAAGCTGAGATGTCCAACACCACAGAATGGGAGCGAAGACCAGCTCAAGAGAGGCAGGAGAGAACCCGCCTTTTCCAGTCCCAAGAGAATATCATCCGCATTGACATGAAGTTGGCAAATGAAGATTTGAGCATGCTGACATTTACATCAAAACAGATTACAGCACCTTTCCTTCTCCCTGAGATGGTTGACAGAGTGGCCAGCATGCTCAATTACTTCTTGTTACAACTTGTGGGTCCCCAAAGGAAATCCCTTACCCTGAAAGACCCTGAAAAGTATGAATTTCGCCCAAAACAGTTGCTTGAGCAGATTGTCTGTATATATGTTCATTTGGCGAGGGGTGATAATGAAAACATATTCCCAGCTGCCATCTCGAAGGATGGGCGGTCATACAATGAGCAGTTATTTACTGCTGCTGTTGATGTCCTTCGGAGAATTGGTGAAGATGGGAGGGTCATCCAGGAATTTATTGAGCTTGGTACAAAAGCCAGGGTTGCAGCTTGTGAGGCAATGGATGCTGAAGCTGCCCTTGGAGAGATACCAGATGAATTCCTTGATCCAATTCAGTGCACTTTGATGAAGGATCCGGTGATCTTACCTTCTTCAAGAATCACAGTTGATAGGCCTGTCATTCAAAGGCATCTTCTGAGTGACAATACTGACCCCTTCAACCGATCCCATCTTACTGTGGACATGTTGATTCCAAACACTGAGTTGAAGGCAAGAATAAAGGAGTTCGTCAGGTCCCAAGAATTAAAGAAGCACGGGGAAGACTTCAGCTTGCAGAGGGCCAAAGATACAATCCAAACCACAACTGAAGAAATGTTGATTGATTAG
Protein:  
MATTSNKPQRSLQEIEDIVLRRILSVSLADSSDPRIFYLEMTAAEILSEGKDLKLTRDLIERVLIDRLSVQSPNAEPPFNYLLGCYRRAVDELKKIANMKDKNVKSELELSIKQVKKLSVSYCRIHLGNPDLFGGDSSVVRKSGNSNVSPVLPLIFAMVDGFNSGGIQPPPPGFIEEFFREGDFDSLDPILKGLYEDLRGNVLKVSVLGNFQQPLRALLFLVSFNVGAKSLVSHKWWIPTGAYVNGRVIEMTSILGPFFHISAWPDNTIFKSEPDVGQQCFSDATNRRPADLLSSFTTIKTLVNNLYDGLAEVLLALLKNGDTRESVLQYLAEVINRNATRAHIQVDPLSCASSGMFINLSAVMLKLSEPFLDANLSKRNKIDPNYVFHNNRLDLRGLTALLASSEEITQWLNTPGKTDISAQSNDVENRLVQSQEATSSGRSGEKSKYSFICECFFMTARVLNLGLLKAFSDFKHLVQEISRCEDMLSTFKALQEQTPSQQLQQDIDRLEKDIELYSQEKLCYEAQILRDGALIQRALSFYRLMLVWLVSLVGGFKMPLPSTCPKEFASMPEHFVEDAMELIIFASRIPKALDGVLLDDFMNFIIMFMASPTYIRNPYLRAKMVEVLNCWMPRRSGSSATASLFEGHQLSLEYLVRNLLKLYVDIELTGSHTQFYDKFNIRHNIAELLEYLWLVPSHRDIWRKIAKEEEKGVYLNFLNFLMNDSIYLLDESLSKILELKGLEAEMSNTTEWERRPAQERQERTRLFQSQENIIRIDMKLANEDLSMLTFTSKQITAPFLLPEMVDRVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLEQIVCIYVHLARGDNENIFPAAISKDGRSYNEQLFTAAVDVLRRIGEDGRVIQEFIELGTKARVAACEAMDAEAALGEIPDEFLDPIQCTLMKDPVILPSSRITVDRPVIQRHLLSDNTDPFNRSHLTVDMLIPNTELKARIKEFVRSQELKKHGEDFSLQRAKDTIQTTTEEMLID